Halil Mert Solak, PhD

Curriculum Vitae

Postdoctoral Researcher, Department of Zoology, Charles University, Prague

Download CV (PDF)

Position

Postdoctoral Researcher

2024 – present

Department of Zoology, Faculty of Science, Charles University, Prague

PI: Jakub Kreisinger

Education

PhD in Biology

2020 – 2024

Graduate School of Natural and Applied Sciences, Zonguldak Bülent Ecevit University, Türkiye

Supervisors: Alexey Yanchukov & Jakub Kreisinger

Thesis: The effect of altitude on gut microbiome composition accounting for diet and host genetics: a study on Anatolian blind mole rats (Nannospalax xanthodon) in the Central Taurus Mountains. January 2024.

BSc in Biology (English)

2012 – 2017

Bolu Abant İzzet Baysal University, Türkiye

Awards and experience

WAME Research Exchange Visit

Apr – May 2023

Wild Animal Microbiome Evolution (WAME), a Special Topic Network funded by ESEB

Host supervisor: Jakub Kreisinger

EMBO Scientific Exchange Grant

Jun – Sep 2022

Laboratory of Evolutionary Interactions of Holobionts, Institute of Vertebrate Biology, Czech Academy of Sciences

Project: "Variation in the composition of gut microbiota of Anatolian blind mole rat (Nannospalax xanthodon) across the altitude gradient"

Host supervisor: Dagmar Čížková

Best Student Publication

Aug 2020

EkoEvo Student Awards, Ecology and Evolutionary Biology Society of Türkiye

Erasmus Internship

Sep – Nov 2018

Department of Animal Behaviour, Bielefeld University, Germany

Host supervisor: Jamie Winternitz

Publications

  1. Yanchukov A, Çetintaş O, Çolak F, Nedyalkov N, Rusin M, Solak HM, Bilgin R, et al. (2026). Genome-wide SNP and mtDNA phylogeny of blind mole rats (Spalacinae Gray, 1821) reflects a complex history of relictualism, expansion, and speciation. Zoological Journal of the Linnean Society 206(1): zlaf186.
  2. Solak HM, Kreisinger J, Čížková D, Sezgin E, Schmiedová L, Murtskhvaladze M, Henning Y, Çolak F, Matur F, Yanchukov A (2024). Altitude shapes gut microbiome composition accounting for diet, thyroid hormone levels, and host genetics in a subterranean blind mole rat. Frontiers in Microbiology 15: 1476845.
  3. Solak HM, Sezgin E, Čížková D, Kreisinger J, Çolak F, Çetintaş O, Yanchukov A (2023). The microbiota of long-living and cancer-free blind mole rat (Nannospalax xanthodon) from the edge of its distribution in Northern Anatolia. Communications Faculty of Sciences University of Ankara Series C Biology 32(2): 105–118.
  4. Uludüz N, Yanchukov A, Solak HM, Sözen M (2023). Cetacean stranding events at Zonguldak, southwestern Black Sea coast of Türkiye. Acta Zoologica Bulgarica 75(1): 123–131.
  5. Solak HM, Yanchukov A, Çolak F, Matur F, Sözen M, Ayanoğlu C, Winternitz JC (2020). Altitudinal effects on innate immune response of a subterranean rodent. Zoological Science 37(1): 1–11.

Posters and presentations

Talks

  • Altitude shapes gut microbiome composition accounting for diet and host genetics in a subterranean mole rat

    Solak HM, Kreisinger J, Čížková D, Sezgin E, Schmiedová L, Murtskhvaladze M, Çolak F, Matur F, Yanchukov A

    Zoologické dny · Ostrava, Czech Republic · 8–9 February 2024

  • Altitudinal effect on gut microbiome composition of long-living and cancer-free blind mole rat (Nannospalax xanthodon)

    Solak HM, Sezgin E, Čížková D, Kreisinger J, Çolak F, Matur F, Yanchukov A

    8th Ecology and Evolutionary Biology Symposium · Ankara, Türkiye · 17–19 July 2023

  • Altitudinal effects on ecoimmunology of Turkish blind mole-rats

    Solak HM, Winternitz JC, Yanchukov A, Ayanoğlu C, Çolak F, Matur F, Sözen M

    Subterranean Rodent Workshop, VII EGSM · Budapest, Hungary · 1 October 2018

Posters

  • Altitudinal effect on gut microbiome composition of Anatolian blind mole rat (Nannospalax xanthodon)

    Solak HM, Sezgin E, Čížková D, Kreisinger J, Çolak F, Matur F, Yanchukov A

    7th Ecology and Evolutionary Biology Symposium · Ankara, Türkiye · 7–9 September 2022

  • Altitudinal effect on gut microbiome composition of Anatolian blind mole rat (Nannospalax xanthodon)

    Solak HM, Sezgin E, Čížková D, Kreisinger J, Çolak F, Matur F, Yanchukov A

    ESEB Congress 2022 · Prague, Czechia · 14 August 2022 · View poster

  • Altitudinal effects on innate immune response and local population genetic structure of Anatolian blind mole-rats (Nannospalax xanthodon)

    Solak HM, Yanchukov A, Çolak F, Matur F, Sözen M, Ayanoğlu C, Winternitz JC

    Zoologické dny · Olomouc, Czech Republic · 6–7 February 2020

  • Altitudinal effects on innate immune response of Turkish blind mole-rats (Nannospalax xanthodon)

    Solak HM, Yanchukov A, Çolak F, Matur F, Sözen M, Ayanoğlu C, Winternitz JC

    6th Ecology and Evolutionary Biology Symposium · İzmir, Türkiye · 10 July 2019

  • Altitudinal effects on evolution of globin gene clusters and host adaptation on Nannospalax xanthodon (Turkish blind mole rat)

    Solak HM, Winternitz JC, Çolak F, Matur F, Yanchukov A

    5th Ecology and Evolutionary Biology Symposium · İzmir, Türkiye · 21 July 2018